‘It’s insidious and it’s getting worse’: AMR and the urgent need for novel antibiotics

The world desperately needs new antibiotics to get ahead of the growing threat of pathogens – disease-causing organisms. However, in the face of unique scientific and financial hurdles, the number of potential drugs in the pipeline has dwindled. Despite these difficulties, some companies, including GSK, are pressing ahead, hoping to revive the field and take on one of the biggest health challenges facing humanity.

Antibiotics were one of the most significant medical discoveries of the 20th century. Before their widespread use in the 1940s, human suffering from bacterial infections was enormous. Infections, from tuberculosis to pneumonia, led to serious illness and sometimes death, while 90% of children with bacterial meningitis died.

The introduction of antibiotics extended people’s lives by an estimated 20 years. But if these medicines stop working, routine surgeries and cancer treatments, which can weaken the body’s ability to respond to infections, would become too risky. Common illnesses and minor injuries could be more complex, costly, and more challenging to treat.

Resistance to antibiotics occurs naturally as bacteria evolve to evade drugs that would normally kill them or stop their growth. However, the widespread use and misuse of treatments in humans, animals and crops has accelerated the process of bacterial evolution that leads to antibiotic resistance.

The situation is already alarming. A report in The Lancet in 2022 estimated drug-resistant bacterial infections directly caused more than 1.2 million deaths in 2019, killing more people than either HIV or malaria. About 20% of deaths were in children under five.

While the rising risk of AMR has become more urgent, progress towards implementing tangible initiatives to address the issue has been patchy.

“Many people, including politicians, now know what AMR is in a way they didn’t a decade ago,” says Sally Davies, the UK special envoy on AMR and England’s former Chief Medical Officer.

“The problem is there are many and multiplying issues to address. But I’m saying, `You’ve actually got another pandemic going on.’ It’s insidious and it’s getting worse.”

In 2013, Davies warned that drug-resistant superbugs posed a “catastrophic threat”, and urged global leaders to take action. She also paid a visit to then UK Prime Minister David Cameron and called for an independent review to assess the risks.

Cameron heeded the warning. The resulting report (PDF - 2.3MB) that he commissioned came to a troubling conclusion: drug resistance, if left unchecked, could kill as many as 10 million people a year by 2050 and result in cumulative economic damage of up to $100 trillion.

“Covid was like a tsunami,” says Robert Bowers, who leads antibiotic commercialisation at GSK. “It hit massively. It hit violently, and it washed over the world, but it will pass.

“AMR is like rising sea levels. It will keep rising. It will not stop, and suddenly we’ll be standing there with water around our knees.”

A medical revolution

Penicillin revolutionised the field of medicine. GSK legacy companies played important roles in the research and manufacture of the drug in the late 1930s.

By 1944, Glaxo produced about 80% of the UK’s penicillin doses through its Greenford site, helping to solve a problem that plagued the WW2 battlefields – the wait time between a soldier being wounded and getting to see a doctor. In the Allied Forces, this was almost 14 hours. Administering penicillin to the wound in the interim vastly increased chances of survival before surgery.

In 1945, Beecham Group established their research arm, Beecham Research Laboratories, with a focus on antibiotics. Twelve years later, their scientists discovered the penicillin nucleus – the core of the molecule, known as 6-APA. From this nucleus they determined they could develop new, even more effective penicillin.

History of antibiotics

Pre-antibiotics

Temple offering of wine, oil, flowers, cakes and bread. Carole Reeves, Wellcome Collection

In ancient Greece, Egypt, and China, mouldy bread was pressed onto wounds to prevent infection.
Now scientists know that the active chemicals and metabolites present in early treatments meant that they were occasionally effective. For example, the moulds on bread produced antimicrobial substances.

1971, Oil painting by Johannes Zacharias Simon Prey, Wellcome Collection

Ancient cultures used plants, moulds and soil to treat bacterial infections. Tetracycline – a natural chemical compound later discovered and patented as an oral antibiotic in the 1940s and 1950s – has been found in human skeletal remains in Egypt and the Sudan that are around 1,500 years old. 

Miasma theory

A man holding his nose to avoid breathing in a miasma. Drawing. Wellcome Collection

Miasma theory asserted that diseases such as cholera, chlamydia, and the Black Death were caused by a noxious form of “bad air” and emanated from rotting organic matter known as miasma. This poisonous vapour was contaminated with these decomposed particles and identifiable by its foul odour.

Originally advanced by Hippocrates in the fourth century BC, it argued that diseases were the product of environmental factors such as contaminated water, bad air, and poor hygiene. It is no longer an accepted scientific theory.

Germ theory

Izzat Suffian, Kuo-Ching Mei, Houmam Kafa & Khuloud T. Al-Jamal.  Wellcome Collection

Germ theory states that microorganisms known as pathogens or “germs” can lead to disease. These organisms are too small to be seen with the naked eye. They invade human, animal, and other living hosts and grow or reproduce, causing disease.

A germ can be any type of microorganism, including bacterium, fungi, or viruses. Basic forms of this theory were proposed by Italian physician Girolamo Fracastoro in 1546. It is still an accepted scientific theory.

Germ theory expanded

Izzat Suffian, Kuo-Ching Mei, Houmam Kafa & Khuloud T. Al-Jamal. Wellcome Collection

Germ theory was expanded by Slovenian physician Marcus von Plenciz. Miasma theory remained the dominant school of medical thought in Europe well into the 19th century.

Smallpox vaccine discovered

Portrait of Edward Jenner.  Wellcome Collection

British physician Edward Jenner demonstrated that an infection with the relatively mild cowpox virus conferred immunity against the deadly smallpox virus, which led to the creation of a smallpox vaccine.

Smallpox vaccinations common

c 1720, Smallpox illustration, Japanese manuscript, Wellcome Collection

Smallpox vaccinations became commonplace in Europe, though doctors were unaware of how it worked or how to extend the principle to other diseases.

Bacteria knowledge increases

Portrait of Louis Pasteur.  1854-1905, Edelfelt, Albert, . Wellcome Collection

Work of French chemist and microbiologist Louis Pasteur and German physician and microbiologist Robert Koch advanced knowledge on bacteria, the specific causes of deadly infectious diseases such as tuberculosis, cholera, and anthrax, as well as pasteurization – the elimination of pathogens from food by treating it with heat.

Portrait of Robert Koch

Their work helped make germ theory the mainstay of European scientific thought – and stamped out existing beliefs in miasma theory.

Viruses are discovered

Herpes simplex virus infection. Wellcome Collection

A virus is an infectious agent that replicates inside the living cells of an organism. Viruses can infect animals, plants, and microorganisms, such as bacteria. Russian botanist Dmitri Ivanovsky wrote an article about non-bacterial pathogens infecting tobacco plants in 1892.

c 1840, A tobacco plant (Nicotiana tabacum). Coloured lithograph. Wellcome Collection

The tobacco mosaic virus was officially discovered by Dutch microbiologist Martinus Beijerinck in 1898. Today, more than 9,000 viruses have been described in detail, though millions exist in almost every ecosystem on Earth.​

Syphilis curing chemical Salvarsan discovered

1881, Photographic illustrations of cutaneous syphilis / by George Henry Fox. Wellcome Collection

German physician Paul Ehrlich, known as the godfather of modern chemotherapy, investigated medicinal dyes that would specifically bind to and destroy pathogenic parasites and bacteria without harming the host.

He was looking for a substance that could target the spirochete – a spiral-shaped type of bacterium — that causes syphilis. Syphilis was a devastating, widespread disease that had claimed thousands of lives since the 15th century. In 1910, Ehrlich discovered the arsenic-containing chemical dye he eventually named Salvarsan – the first chemical compound shown to cure syphilis.

Penicillin discovered

Portrait of Alexandar Flemming

Alexander Fleming discovered the first antibiotic, penicillin, quite by accident. He returned home from holiday to find mould growing on a petri dish of Staphylococcus bacteria. The mould, he noticed, appeared to be preventing the bacteria around it from growing.

After further investigation, he identified that the mould produced a self-defence chemical that could kill the bacteria. However, it took over a decade before penicillin was introduced as a treatment for bacterial infections.

Prontosil discovered

1936-1940, Box of five ampoules of Prontosil, Germany. Science Museum London. Wellcome Collection

The first commercially available antibacterial drug was Prontosil, which was developed by the German biochemist Gerhard Domagk. It was the first drug of the sulfonamide class of antibiotics and was used to greatly increase the success of antimicrobial chemotherapy.

At the time, disinfectant cleaners and antiseptic solutions were used on wounds outside of the body, but few medicines existed that could safely be used inside living bodies.

Term ‘antibiotic’ coined

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Jewish-American microbiologists Selman Waksman and Albert Schatz discovered streptomycin, the first effective drug against gram negative bacteria and the first antibiotic used to cure tuberculosis. It was also the first time the term “antibiotic” had been used. It means "opposing life", which came from the Greek word ἀντι anti, "against" and βίος bios, "life”.

Penicillin becomes available on large scale

Poster advocating the benefits of Penicillin. Wellcome Collection

Penicillin was introduced on a large scale as a treatment for bacterial infections. This was possible through the work of Oxford University scientists Sir Howard Florey and Ernst Chain, who managed to efficiently purify the antibiotic. The discovery won them and Fleming the Nobel Prize for physiology or medicine.

1944, gsk.com

By 1944, Glaxo produced about 80% of the UK’s penicillin doses through its Greenford site, helping to solve a problem that plagued the WW2 battlefields. Administering penicillin to the wounds of soldiers while they waited hours for surgery vastly increased their chances of survival.

The golden era of antibiotics

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Most of the antibiotic classes we use as medicines today were discovered and introduced to the market. Each class typically contains several antibiotics that have been discovered over time or are modified versions of previous types.

There are for example numerous β-lactams (pronounced beta-lactams) such as different penicillins and cephalosporins (skip to 1964 to learn more about this class of drugs).

The penicillin nucleus is cracked

Penicillin Nucleus

Scientists from GSK legacy company Beecham successfully broke penicillin into its component parts, including its nucleus, called 6-APA, and side chains. Using this nucleus researchers were then able to design and attach new side chains to create semi-synthetic versions of the drug, ushering in a whole new range of more effective antibiotic drugs.

The first cephalosporin antibiotic is launched

Portrait of Guiseppe Brotzu

Italian Professor Guiseppe Brotzu discovered a fungus growing in seawater near a sewage outfall off the coast of Sardinia in 1945. In 1953 Oxford scientist Florey discovered that it contained cephalosporin C, an antibiotic that could be used against gram-positive bacteria such as Staphylococcus and Streptococcus.

The new class of drugs were marketed from 1964 and used mostly to treat skin and soft tissue infections, as well as to prevent infections during surgery.

Synthetic versions of antibiotics developed

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From 1935 to 1968, twelve new classes of antibiotics were developed. But in the 1970s to 1980s, the antibiotics pipeline slowed to a trickle and some pharmaceutical companies started to fold discovery projects. On top of this, the mass production of new drugs over a relatively short period led to excessive use of antibiotics.

Fight against AMR

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Resistance to antibiotics occurs naturally as bacteria evolve to evade drugs that would normally kill them or stop their growth. However, the widespread use and misuse of treatments in humans, animals and crops accelerated the process of bacterial evolution that led to AMR, or antimicrobial resistance.

To combat AMR, classes of antibiotics were improved and modified.

Antibiotics pipeline diminishes

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Investment into discoveries of new classes of antibiotics remained stark. In 2014 British Prime Minister David Cameron commissioned a review into AMR. It found that 10 million people could die a year by 2050 if it was left unchecked.

Despite this, by 2022, a World Health Organization report estimated that only 27 experimental antibiotics were under development against priority pathogens. Of those, just six fulfilled at least one of the WHO’s innovation criteria and two would be able to target highly-drug resistant forms of bacteria.

The Fleming Initiative is founded

GSK became the first founding partner of the Fleming Initiative, an innovative and collaborative approach led by Imperial College Healthcare NHS Trust and Imperial College London to tackle antimicrobial resistance (AMR) around the world. The company made a £45million pledge available for approved projects to harness new technology including AI to better interpret and use complex scientific data, identify new opportunities to develop novel treatments and interventions, and more.

New approaches offer hope

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Companies are exploring multiple technologies to fight pathogens such as Pseudomonas aeruginosa and Klebsiella pneumoniae, and next generation vaccines for Streptococcus pneumonia. GSK continues to evolve its infectious disease pipeline to include new classes of antibiotics to address the rising threat of AMR. The Multiple Antigen Presenting System, or MAPS, is also part of this toolbox, as are other vaccine technologies.

Over the following decades, antibiotics have helped reduce deaths from infectious diseases by more than 70% and have continued to play a crucial role in making surgeries much safer. However, in recent years, the discovery of new drugs has slowed to a crawl – and bacterial resistance has increased apace.

As a result, many of the big players have pulled out of antibiotic production, and smaller companies have gone bust. What’s more, the limited number of new antibiotics discovered since the 1980s are largely variations of older drugs.

Still in the hunt

Despite the daunting odds, and driven by the urgent need to tackle AMR, some companies are forging ahead. GSK remains in the hunt around 80 years after its first efforts to produce penicillin during World War II. Now, more than a dozen R&D projects at the company could help target pathogens deemed critical or urgent by the WHO.

These projects include vaccines, which are also an important part of the solution. Of the top six bacterial pathogens responsible for AMR deaths, only one – Streptococcus pneumonia – has a vaccine, the WHO said in 2022.

Companies are exploring multiple technologies to fight pathogens such as Pseudomonas aeruginosa and Klebsiella pneumoniae, and next generation vaccines for Streptococcus pneumonia. GSK’s Multiple Antigen Presenting System, or MAPS, is part of this toolbox.

A primary target for GSK is urinary tract infections (UTIs), which affect about half of women and one in 20 men during their lifetimes. One of the most common outpatient infections, uncomplicated UTIs are becoming increasingly resistant to antibiotics.

Scientists are relying on a new approach that blocks two key enzymes that enable bacterial cells to replicate their DNA. In current antibiotics used to treat UTIs through these enzymes, only a single mutation is needed to cause resistance, says Neil Osheroff, a professor of biochemistry and medicine at Vanderbilt University. His team specialise in examining the mechanism of early-stage antibiotics.

With the new approach, researchers are hoping to gain an edge.

“This novel mechanism means that new antibiotics should defeat resistant pathogens that have mechanisms that currently protect them from other antibiotics,” Osheroff says.

The work is part of a broader race to find novel antibiotics before infections become untreatable. A WHO analysis published in 2022 estimated that only 27 experimental antibiotics were under development against priority pathogens. Of those, just six fulfilled at least one of the WHO’s innovation criteria and two would be able to target highly-drug resistant forms of bacteria.

“Time is running out,” Osheroff continues. “New drug classes are incredibly important to extend the clock.”

Partnering with others on a mission to tackle AMR is key to GSK’s antibiotics strategy.

BioVersys, a Swiss pharmaceutical company taking aim at the highest priority pathogens, is one of GSK’s collaborators. The company has received funding from the $1 billion AMR Action Fund – a powerful alliance of stakeholders investing in antibiotic development. Some of the focus is also shifting to phage therapy, which relies on naturally occurring, bacteria-killing viruses known as bacteriophages, says Henry Skinner, the fund’s chief executive officer.

Keeping the antibiotics pipeline afloat isn’t the only challenge for the fund, Skinner adds. There’s another problem: replacing all the scientists who have left the field after their projects faltered and likely won’t return.

“We’re losing the human talent,” Skinner says. “That’s one of the biggest risks in the intermediate term.”

Coordinated action

A shake up in the way governments around the world pay for antibiotics is also critical to tackling AMR, says Kevin Outterson, executive director at CARB-X – a Boston-based nonprofit which also invests in antibiotic developers such as BioVersys and more than 90 others.

“We mobilised significantly, and for good reason, on HIV and malaria,” Outterson says. “We have global institutions spending billions to try to bring those diseases to zero, but we’re arguing about spending a tenth of that on AMR, a threat that kills more people today than HIV or malaria.”

But policy makers are already taking some positive steps to rekindle investment, he adds.

A pioneering program in the UK is providing developers with a fixed annual fee regardless of how much, or how little, of their drugs are used, basing payments on the value of the drugs to the health system rather than the volumes used. Proposed legislation in the US also calls for a subscription-style model that would give companies upfront payments in exchange for access to antibiotics. Other governments plan their own measures to change the way they pay for antibiotics.

In May 2024, GSK became the first founding partners of the Fleming Initiative, a collaborative approach led by Imperial College Healthcare NHS Trust and Imperial College London to tackle antimicrobial resistance (AMR) around the world. The company made a £45 million pledge available for approved projects to harness new technology including AI to better interpret and use complex scientific data, identify new opportunities to develop novel treatments and interventions, improve understanding of how drug-resistant infections are transmitted and can be prevented, and more.

Getting a novel antibiotic or two across the finish line and making it a commercial success could provide a spark for the industry as it waits for government policies to encourage research and development, says GSK’s Bowers.

“People need a success to prove that this can be done,” Bowers says. “Otherwise, the sea levels are going to keep rising, and no one will take this on.”

Davies, whose efforts helped pave the way for a 2016 United Nations declaration to combat AMR, is keeping up the momentum.

She says she’s helping to develop a new roadmap ahead of a key UN meeting in 2024, while seeking to raise awareness among investors, bring more young people into the campaign and set targets on global antibiotic use and stewardship.

“We need to be bold again,” she says.

This article was first published in April 2023